Ion Channel Screening Assays
Ion Channel Screening Assays
Aurora Biomed provides a wide range of ion channel assays to quickly and accurately provide results for drug discovery and development research worldwide. A convenient, integrated ordering system facilitates rapid assessment and processing of globally standardized tests. Assays are performed manually by patch clamp or by Qpatch. Cold flux assays are also available for limited compounds or candidates that cannot be screened with manual patch clamp, with a strong linear correlation (R=0.88) and consistently identical drug rank orders between the cold flux and patch clamp methods. Cold flux assays rely on non-radioactive trace ions measured by Aurora’s high-throughput atomic absorbance-based Ion Channel Reader series: ICR 8000 and ICR 12000
Electrophysiological in vitro and in vivo studies required by the FDA are available on either stable cell lines, cells transiently expressing channels of interest, transformed Xenopus oocytes (two-electrode voltage clamp), cardiac myocytes (freshly isolated from rat or guinea pig), or neurons differentiated from human iPS. Please contact [email protected] for more information.
The following Ion Channel Screening Assays are available from Aurora:
Application | Ion Channel | Ionic Current | Patch Clamp | QPatch | |
---|---|---|---|---|---|
Cardiac | hERG/Kv11.1 | IKr | |||
Nav1.5 | Peak, late INa | ||||
Kv1.5 | IKur, Isus | ||||
Kv4.3/KChIP | Ito | ||||
KCNQ1 (Kv7.1)/KCNE1 | IKs | ||||
HCN2 | If | ||||
HCN4 | If | ||||
Kir2.1 | IK1 | ||||
Kir3.1/Kir3/4 | IKACh | ||||
Kv1.4 | IIto | ||||
Endogenous Cl– | |||||
CNS | TRPV1 | TRPV1 | |||
Nav1.2 | INa | ||||
Nav1.6 | INa | ||||
Nav1.7 | INa | ||||
Kv1.2 | Delayed rectifier | ||||
Kv2.1 | Delayed rectifier | ||||
Kv3.1 | Delayed rectifier | ||||
Kv3.2 | Delayed rectifier | ||||
Kv4.2 | IA | ||||
Stretch-activated K | Delayed rectifier | ||||
HCN2 | hyperpolarization-activated cyclic nucleotide-gated ion channel | ||||
Cav1.3 | L type Ca channel | ||||
Cav1.4 | L type Ca channel | ||||
Cav2.1 | P/Q-type Ca channel | ||||
Cav2.2 | N-type Ca channel | ||||
Cav2.3 | R-type Ca channel | ||||
Cav3.1 | T-type Ca channel | ||||
Cav3.3 | T-type Ca channel | ||||
Co-transporters | Na/K-ATPase | antiporter enzyme / cotransporter | |||
Na, K, Cl co-transporters | cotransporter | ||||
Skeletal muscle | Nav1.4 | INa | |||
Immune System | Kv1.3 | Delayed rectifier | |||
Cold Flux available for all assays. Some also performed by Manual Patch Clamp or Qpatch as indicated. |
Cardiac Myocyte Assays
Freshly isolated cardiac myocytes are collected from from rat or guinea pig. Parameters measured:
- IC50 generated from dose-response curves at various frequencies
- Use dependence, voltage-dependence of block
- Custom-made protocols to address specific needs
Please contact [email protected] for more information.
Reliable, Reproducible Results
The robustness of Aurora Ion Channel Screening Assays is shown in the below figures. No matter the stage of drug discovery, obtaining quick and accurate results is key to any research assay.
Figure 1: IC50 of flecainide for IhERG in CHO cells expressing hERG channels (Qpatch) and in HEK cells expressing hERG channels (manual patch clamp).
Figure 2: IKv4.2 block by flecainide in HEK cells expressing Kv4.2 channels by manual patch Clamp.
Figure 3: The effects of mexiletine on peak and late INav1.5 measured by Qpatch (in the presence of the sea anemone toxin ATXII)
Scope of Screening Services
Typical test compound screening services are completed as follows, depending on research requirements. Raw data can be sent (without analysis) upon request.
Full Characterization | |
---|---|
1 | a. Full DR curve with 5-7 points, each averaged from at least 3 independent estimations, or; b. Results are fitted to the Hill equation for accurate estimation of IC50. If the coefficient of variability (SD/mean) exceeds 25% at IC50, up to 6 independent estimates are provided for the same price. |
2 | Effect of the compound (at ~IC50) on I-V and G-V curves, including fit to Boltzmann equation and estimate of any shifts in G-V curve. |
3 | Effect of the compound on the kinetics of voltage-dependent inactivation of the channel at 3 voltages. |
Partial Characterization | |
1 | DR curve with 4-5 points, each averaged from at least 3 independent estimations. |
2 | Effect of the compound (at IC50) on I-V curve. |
Preliminary Characterization | |
1 | a. Compound tested at a single dose in duplicate (n=2) at one voltage, or; b. Compound tested at two different doses at 3 voltages each (n=3). |
Additional Characterization | |
1 | Effect of the compound on steady-state inactivation curve. |
2 | For N-type Ca2+ channels, additional estimates of the effect of the compound on channel regulation by G proteins, including estimation of the change in the extent of voltage-dependent facilitation and/or inhibition by a G protein-coupled receptor. |